Index

A

AltSbmlFormat (class in biomodels_qc.convert)

are_biopax_files_the_same() (in module biomodels_qc.utils)

B

biomodels_qc module biomodels_qc.convert module biomodels_qc.utils module biomodels_qc.validation module

biomodels_qc.warnings module BiomodelsQcWarning BioPAX_l2 (biomodels_qc.convert.AltSbmlFormat attribute) BioPAX_l3 (biomodels_qc.convert.AltSbmlFormat attribute) build_combine_archive() (in module biomodels_qc.utils)

C

convert_entry() (in module biomodels_qc.convert)

convert_sbml() (in module biomodels_qc.convert)

D

does_sbml_file_represent_core_kinetic_model() (in module biomodels_qc.utils)

F

FileCouldNotBeConvertedWarning

G

get_smbl_files_for_entry() (in module biomodels_qc.utils)

I

is_sbml_file() (in module biomodels_qc.utils)

M

MATLAB (biomodels_qc.convert.AltSbmlFormat attribute) module biomodels_qc biomodels_qc.convert biomodels_qc.utils biomodels_qc.validation biomodels_qc.warnings

O

Octave (biomodels_qc.convert.AltSbmlFormat attribute)

OMEX_Metadata (biomodels_qc.convert.AltSbmlFormat attribute)

R

run_sbf_converter() (in module biomodels_qc.convert)

S

SBML_URN (biomodels_qc.convert.AltSbmlFormat attribute)

V

validate_combine_archive() (in module biomodels_qc.validation) validate_copasi_file() (in module biomodels_qc.validation) validate_copasi_file_in_subprocess() (in module biomodels_qc.validation) validate_entry() (in module biomodels_qc.validation) validate_filename() (in module biomodels_qc.validation) validate_image_file() (in module biomodels_qc.validation) validate_ipynb_notebook_file() (in module biomodels_qc.validation) validate_matlab_data_file() (in module biomodels_qc.validation) validate_octave_file() (in module biomodels_qc.validation)

validate_owl_ontology_file() (in module biomodels_qc.validation) validate_pdf_file() (in module biomodels_qc.validation) validate_python_file() (in module biomodels_qc.validation) validate_sbml_file() (in module biomodels_qc.validation) validate_scilab_file() (in module biomodels_qc.validation) validate_sedml_file() (in module biomodels_qc.validation) validate_vcml_file() (in module biomodels_qc.validation) validate_xml_file() (in module biomodels_qc.validation) validate_xpp_file() (in module biomodels_qc.validation) validate_zip_file() (in module biomodels_qc.validation)

X

XPP (biomodels_qc.convert.AltSbmlFormat attribute)